Effect of Lower Atmospheric Waves on the Ionosphere and Thermosphere R.W. Schunk, L. Gardner, L. Scherliess, D.C. Thompson and J.J. Sojka Center for Atmospheric & Space Sciences, Utah State University, Logan, Utah 84322-4405 We are developing a thermosphere-ionosphere-plasmasphere data assimilation model that will be used as an upper atmospheric component for an ocean-atmosphere model. The ionosphere - plasmasphere data assimilation model was developed as part the Global Assimilation of Ionosphere Measurements (GAIM) program. This data assimilation model is based on a physics-based model of the ionosphere-plasmasphere system that covers the E-region, F-region, topside ionosphere, and plasmasphere (90 – 30,000 km). The model is capable of assimilating data from a variety of sources, including bottomside Ne profiles from ionosondes, slant GPS/TEC from a network of stations, in situ Ne from DMSP satellites, line-of-sight UV emissions measured by satellites, and occultation data. The data are assimilated via an ensemble Kalman filter technique. In addition to the global N e distribution, the data assimilation model also provides global distributions of the self-consistent drivers (neutral winds & composition, electric fields, and particle precipitation). The thermosphere data assimilation model has been constructed from a physics-based, global, thermosphere model using an ensemble Kalman filter technique. This model will eventually be able to assimilate UV radiances from the SSUSI and SSULI instruments, is situ winds and densities along satellite tracks, and satellite drag data. The goal is to couple the thermosphere-ionosphere-plasmasphere data assimilation model to the Navy’s troposphere-mesosphere weather model (NOGAPS-ALPHA) at 90 km, which will allow for studies of the effect that tropospheric weather disturbances have on the upper atmosphere. Preliminary simulations have been conducted of the effect that upward propagating tides (diurnal, semi-diurnal, terdiurnal), sound waves, and gravity waves have on the ionosphere –thermosphere system. The status of this modeling effort will be reviewed. The wave effects will also be compared with thermosphere disturbances generated by the ionosphere.